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Figure 5 | BMC Biophysics

Figure 5

From: Molecular basis of HHQ biosynthesis: molecular dynamics simulations, enzyme kinetic and surface plasmon resonance studies

Figure 5

Binding mode of ACoA. A) Final poses of the single-ACoA simulation C1 (cyan; 37 ns) and of the dual-ACoA simulation C2 (green; 31 ns) are superimposed with the PDB structure 3H77 (ACoA orange - starting position; anthranilate-Cys112 in magenta – overlaps with ACoA C1 ). Phe32, Arg153, Asn154, Phe218, His257, Asn287 and Ser317 of the single-ACoA simulation at 37 ns are shown as dark cyan sticks. B) Decomposed energy contributions per residue (at least for one MD >0.5 kcal/mol) determined by MM-GBSA methods for the MD simulations C1 (cyan) and C2 (chain A – red; chain B – black).

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