Skip to main content

Table 2 Probe sequences

From: Stability of double-stranded oligonucleotide DNA with a bulged loop: a microarray study

loop position

loop length

Probe sequence

length (bases)

PM Probe

 

3'-TTCAATACTACTCATAATTACCAACAACATTAC-5'

33

7

1

3'-TTCAATATCTACTCATAATTACCAACAACATTAC-5'

34

7

2

3'-TTCAATATTCTACTCATAATTACCAACAACATTAC-5'

35

.

.

 

.

.

.

 

.

.

.

3'TTCAATATT..CTACTCATAATTACCAACAACATTAC-5'

.

7

13

3'-TTCAATATTTTTTTTTTTTTCTACTCATAATTACCAACAACATTAC-5'

46

8

1

3'-TTCAATACTTACTCATAATTACCAACAACATTAC-5'

34

8

2

3'-TTCAATACTTTACTCATAATTACCAACAACATTAC-5'

35

.

.

 

.

.

.

 

.

.

.

 

.

26

13

3'-TTCAATACTACTCATAATTACCAACATTTTTTTTTTTTTACATTAC-5'

46

  1. Synthesized probe sequences (features) on the DNA microarray surface.
  2. Bold letters highlight the additional thymine bases. Altogether, there are 261 different features.
Back to article page

BMC Biophysics

ISSN: 2046-1682

Contact us