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Figure 3 | BMC Biophysics

Figure 3

From: Numerical calculation of protein-ligand binding rates through solution of the Smoluchowski equation using smoothed particle hydrodynamics

Figure 3

Comparison of SPH solutions (symbol) to the analytical solution (line) for the Smoluchowski equation subject to the Robin BC on r=R 1 and Dirichlet BC on r=R 2 at steady-state with the relative L 2 errors for different resolutions. Specifically, L 2=0.00914 for Δ x=8Å(green square), L 2=0.00598 for Δ x=4Å(blue circle), and L 2=0.00377 for Δ x=2Å(red triangle).

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BMC Biophysics

ISSN: 2046-1682

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