Structural location | Subunit, residue and mutation | Activity in Sc (Tt or Ec) | References | |||
---|---|---|---|---|---|---|
Tt RNAP | Ec RNAP | Sc RNAP II | in vivo | in vitro | ||
Switch residue | β R557 | β R678C | Rpb2 R766Q/A | Lethal | (Ec minor defects) | |
Switch residue | β N683 | β N811 | Rpb2 N834A | 6-AUs | Very slow, moderate fidelity defect | this paper |
Mg2+ binding | β E685 | β E813 | Rpb2 E836A | 6-AUs | Slow, severe fidelity defect (Ec slow elongation) | |
Mg2+ binding | β D686 | β D814 | Rpb2 D837A | Lethal | (Ec slow elongation) | |
Switch residue | β N872 | β N1099 | Rpb2 1013A |  | Slow | this paper |
γ-phosphate | β S878 | β S1105 | Rpb2 S1019F | 6-AUs | Slow, severe fidelity defect | this paper |
γ-phosphate | β R879 | β R1106 | Rpb2 R1020K/Q | Lethal |  | [43] |
Switch residue | β’ D784 | β’ D505 | Rpb1 D526A | Lethal |  | this paper |
H3/H4 hinges, bridge helix | Â | Â | Rpb1 G819A, G820A, G823A | Lethal | Â | this paper |
H3 hinge, bridge helix | β’ G1076 | β’ G778 | Rpb1 G819A |  | Slow, minor fidelity defect | |
H3 hinge, bridge helix | β’ A1077 | β’ A779 | Rpb1 G820A |  | Slow, moderate fidelity defect | |
H3/H4 hinges, bridge helix | β’ R1078 | β’ R780C | Rpb1 R821Q/A |  | R821Q slow, R821A lethal (Ec termination defects) | |
H3/H4 hinges, bridge helix | β’ K1079 | β’ K781A | Rpb1 E822 |  | (Ec very slow elongation) | [35] |
H4 hinge, bridge helix | β’ G1080 | β’ G782 | Rpb1 G823A |  | Little effect, moderate fidelity defect | |
H1 hinge, trigger loop | Â | Â | Rpb1 G1073A, P1075A | Lethal | Â | this paper |
H1 hinge, trigger loop | β’ G1230 | β’ G924 | Rpb1 G1073A |  | Slow, strong fidelity defect | this paper, [2] |
H1 hinge, trigger loop | β’ E1231 | β’ E925 | Rpb1 E1074A |  | Fast | this paper, [2] |
H1 hinge, trigger loop | β’ P1232 | β’ P926 | Rpb1 P1075A | Lethal |  | this paper, [2] |
H1 hinge, trigger loop | β’ T1234 | β’ T928 | Rpb1 T1077A | Lethal |  | this paper, [2] |
H1 hinge, trigger loop | β’ Q1235A | β’ Q929 | Rpb1 Q1078A | Lethal | (Slow, error-prone in Tt) | |
H2 hinge, trigger loop | Â | Â | Rpb1 G1097A, P1099A | Â | Rapid in elongation, moderate fidelity defect | this paper, [2] |